Package index • EcoCleanR

All functions

decimal_places(): Get Decimal Places of Coordinate Values
distance_calc(): Calculate geographic distance and mahalanobis distance to estimate outlier probability of a data point
ec_db_merge(): Merge the Data sets Extracted from Various datasources.
ec_extract_env_layers(): Extract the Environmental data
ec_filter_by_uncertainty(): Flag the Occurrences those has Extreme Uncertainty Error Radius
ec_flag_non_east_atlantic(): Flag the occurrences those are not in east Atlantic and are inland
ec_flag_non_east_pacific(): Flag occurrences those are not in east Pacific and are inland
ec_flag_non_region(): Flag Occurrences those are in wrong ocean basins and are inland
ec_flag_non_west_atlantic(): Flag Occurrences those are not in west Atlantic and are inland
ec_flag_non_west_pacific(): Flag occurrences those are not in east Pacific and are inland
ec_flag_outlier(): Flag Outlier Occurrences - using Spatial and Non-spatial Attributes
ec_flag_precision(): Flag occurrences those has bad precision
ec_flag_with_locality(): Filter records to georeference using GEOLocate
ec_geographic_map(): Map view of occurrence data points
ec_geographic_map_w_flag(): Map view to visualize data points with outlier probability 0 to 1 on a map view
ec_impute_env_values(): Impute Environmental Variables using Mean Values of occurrences within a certain radius
ec_merge_corrected_coordinates(): Merge the Update Georeferenced Occurrence Points back to the Main Data File.
ec_plot_distance(): Scatter Plot between geo_distance vs maha_distance with geo- and maha- Quantile Threshold to Demonstrate the Outliers outside those threshold.
ec_plot_var_range(): Plot cleaned data overlay overall occurrence data to demonstrate accepted ranges of spatial and non-spatial attributes
ec_rm_duplicate(): Remove Duplicate Records from the Merged Data
ec_trail_zero(): Trail Zeros from the Coordinate Values
ec_var_summary(): A Summary Table of Final Cleaned Spatial and Environmental Variables
ec_worms_synonym(): Check Accepted Synonyms from WoRMs Taxonomy
ecodata: dataset1: Documentation of data file - ecodata.rda
ecodata_cleaned: dataset4: Documentation of data file - ecodata_cleaned.rda
ecodata_corrected: dataset2: Documentation of data file - ecodata_corrected.rda
ecodata_with_outliers: dataset3: Documentation of data file - ecodata_with_outliers.rda
ecodata_x: dataset5: Documentation of data file - ecodata_x.rda
example_sp_invertebase: dataset6: Documentation of data file - example_sp_invertebase.rda
haversine_kmeans(): Calculate Harversine distance